Create your own visualization

Scaffold and Flatmap visualization on the SPARC Portal

Approved flatmaps and published scaffolds can be viewed on the portal with viewers created using the Vue.Js framework and these viewers can be reused and deployed elsewhere. Here is a brief description of the viewers:

ScaffoldVuer

ScaffoldVuer is the javascript front end application written using Vue.JS framework to visualize scaffolds. It currently accepts an in house json format, OBJ, STL and GLTF format. It has the capability to export currently visualized objects with the GLTF format.

• Scaffoldvuer demo
• Example of an accepted generic brainstem scaffold on Portal
• Repository and documentation

FlatmapVuer

• Flatmapvuer demo
• Example of flatmap zoomed into a region on the Portal
• Repository and documentation

MapVuer

MapVuer is the integration of multiple different modules to provide a streamline workflow, the modules include scaffoldvuer, flatmapvuer, plotvuer and simulationvuer and a search engine (sidebar).

Flatmapvuer is the primary viewing tool on the mapvuer and the markers are added to the flatmap to indicate locations of interest (e.g., locations of SPARC datasets), clicking on these will trigger a search on the sidebar, then displays all relevant datasets and the corresponding actions such as open scaffolds, plots, simulations, and etc.

• MapVuer on Portal
• Repository and documentation